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Contents:

  • Quick Start Guide
    • Data Preparation
    • WMH Extraction
    • Output
    • Folder structure of UBO Detector output
    • Image Output
    • Text File Output
  • Advanced settings for WMH segmentation
    • DARTEL Template
    • k for kNN
    • kNN training set
    • Probability threshold
  • Customize the kNN Classifier
  • Longitudinal Pipeline
    • Data Preparation
    • Running Longitudinal Pipeline
  • Leave-one-out Cross Validation
  • Other functions after WMH segmentation
    • Manual Editing
    • Re-extraction
    • View kNN search
  • TOolbox for Probablistic MApping of Lesions (TOPMAL)
    • Citation
    • TOPMAL GUI User Guide
    • TOPMAL Commandline User Guide
  • TOPMAL Output
    • Image output from TOPMAL
    • Text output from TOPMAL
    • JHU WM tracts
    • HO subcortical
CNS
  • Docs »
  • Search
  • Edit on GitHub

© Copyright 2019, Jiyang Jiang, Forrest Koch, Wei Wen Revision adfb7608.

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